* Continuing massive refactor

  * Sorting and organizing properties file

src/main/resources/genetic.properties

-logfilePath = log.txt
-populationSize = 10
-# Do NOT go OVER 1_000_000 generations, as the filenames don't play nice then
-noGenerations = 10
-# proportional OR tournament OR onlybest
-selection = proportional
-# curl, straight, random
-initializationMethod = curl
-# Number of tournament participants
-k = 5
-pointsPerBond = 1
+### Basic Initialization settings
+    # Variant used for the encoding [NESW | FRL]
+        encodingVatiant = NESW
+    # Seed for the random number generator, -1 for none
+        seed = 0123210
 
-# Guaranteed mutation in the first generation
-mutationAttemptsPerCandidate = 1
-mutationChance = 1.0
-# Decline in mutation probability with generations -> ex with 0.05: 2nd 0.95, 3rd 0.9025, 4th 0.857
-mutationDecline = 0.001
-crossoverAttemptsPerCandidate = 1
-crossoverChance = 0.6
-crossoverDecline = 0.005
 
-# For video
-imageSequencePath = ./visualization/series
-videoPathAndFile = ./visualization/video.mp4
-# ms between images
-imgInterval = 100
+### Algorithm settings
+    # Size of the population in one generation
+        populationSize = 10
+    # Number of generations to run the algorithm for [0 - 1.000.000] -> because of filename sorting
+        noGenerations = 10
+    # Type of population initialization [curl | straight | random]
+        initializationMethod = curl
+    # Type of selection that should be used [proportional | tournament | onlybest]
+        selection = proportional
+    # Number of tournament participants, only relevant when selection is set to tournament
+        k = 5
+    # Type(s) of mutators to use in the algorithm, separated by comma [singlePoint / crossover]
+        mutatorsToUse = singlePoint,crossover
+    # Points each HH bond gives
+        pointsPerBond = 1
 
 
-# TODO:
-createVideo = true
-randomSeed = 0123210
\ No newline at end of file
+### Mutation settings
+    # How often a single point mutation should be attempted per candidate
+        mutationAttemptsPerCandidate = 1
+    # Chance for a successful single point mutation [1.0 = 100%]
+        mutationChance = 1.0
+    # Multiplicand for mutation probability with each generation -> ex with 0.05: 1st 1.0, 2nd 0.95, 3rd 0.9025, 4th 0.857
+        mutationDecline = 0.001
+    # How often a crossover should be attempted per candidate
+        crossoverAttemptsPerCandidate = 1
+    # Chance for a successful crossover [1.0 = 100%]
+        crossoverChance = 0.6
+    # Multiplicand for mutation probability with each generation -> ex with -0.05: 1st 1.0, 2nd 1.05, 3rd 1,1025, 4th 1,157
+        crossoverDecline = 0.005
+
+
+### Output settings
+    # Path and filename for the log file, always active
+        logfilePath = log.txt
+    # Type(s) of visualization to enable, separated with comma [console / image / video]
+        visualizerType = image,video
+    # Path for the image sequence
+        imageSequencePath = ./visualization/series
+    # Path and filename for the resulting video file
+        videoPathAndFile = ./visualization/video.mp4
+    # ms between images in the beginning of the video
+        imgInterval = 100
+    # Decline of interval between images to speed up later generations
+        imgIntervalDecline = 0.01
+    # Minimum time between images
+        imgIntervalMin = 10
+    # Zoom to the appropriate size, once no bigger proteins are going to follow
+        zoom = false